Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRTM1Q9HBL6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC132872.4-202ENST00000622924 2756 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AL139384.1-201ENST00000612143 3047 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 UNC93B7-201ENST00000509439 705 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC105339.3-201ENST00000560043 636 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AL356488.2-201ENST00000602755 427 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC020765.3-201ENST00000613051 740 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC010654.1-201ENST00000615722 808 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 AC024909.3-201ENST00000611513 2257 ntBASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms