Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.21■□□□□ 0.67
SH2D4AQ9H788 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SH2D4AQ9H788 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
SH2D4AQ9H788 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AL512652.2-201ENST00000625156 1716 ntBASIC19.2■□□□□ 0.66
SH2D4AQ9H788 OR6D1P-203ENST00000641209 4860 ntBASIC19.2■□□□□ 0.66
SH2D4AQ9H788 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AL645728.1-201ENST00000366221 2101 ntBASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 UGT1A2P-201ENST00000454886 866 ntBASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.2■□□□□ 0.66
SH2D4AQ9H788 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 CETN4P-206ENST00000642099 2168 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC124067.4-201ENST00000519691 2379 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 HLA-J-202ENST00000469281 1241 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC004890.2-204ENST00000481968 304 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC024267.1-201ENST00000582320 895 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AL138828.2-201ENST00000615812 383 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AL590560.3-201ENST00000623350 461 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 AC008761.3-201ENST00000624803 892 ntBASIC19.19■□□□□ 0.66
SH2D4AQ9H788 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SH2D4AQ9H788 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4AQ9H788 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms