Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAF4Q9BUZ4 AC002310.6-201ENST00000624451 1377 ntBASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AP001160.2-201ENST00000596071 487 ntBASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AL805961.1-202ENST00000641562 540 ntBASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAF4Q9BUZ4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 GPR89P-201ENST00000407924 1495 ntBASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 AC097637.2-201ENST00000624096 1997 ntBASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 MCCD1P2-201ENST00000423228 335 ntBASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 RPS8P6-201ENST00000426177 609 ntBASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 RNF216P1-203ENST00000404404 2427 ntBASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms