Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 SNX33P1-201ENST00000592116 1762 ntBASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 AL031731.1-201ENST00000642131 2094 ntBASIC17.48■□□□□ 0.39
RHOXF2Q9BQY4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 AC136621.1-201ENST00000624017 2304 ntBASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 NUS1P1-201ENST00000446295 882 ntBASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 AC008550.1-201ENST00000511500 884 ntBASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHOXF2Q9BQY4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 SSR4P1-203ENST00000599569 2260 ntBASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 LINC01568-207ENST00000641790 1380 ntBASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 AP002414.1-201ENST00000391405 1147 ntBASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 VENTXP5-201ENST00000523979 775 ntBASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 AC073592.5-201ENST00000624854 528 ntBASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 FAM45BP-202ENST00000592932 1624 ntBASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.46■□□□□ 0.39
RHOXF2Q9BQY4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
RHOXF2Q9BQY4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
RHOXF2Q9BQY4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RHOXF2Q9BQY4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RHOXF2Q9BQY4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RHOXF2Q9BQY4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RHOXF2Q9BQY4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RHOXF2Q9BQY4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms