Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2E2Q96LR5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 LINC00628-201ENST00000628516 1289 ntBASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 AL031731.1-201ENST00000642131 2094 ntBASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2E2Q96LR5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UBE2E2Q96LR5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms