Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 MIR346-201ENST00000362234 95 ntBASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AC142381.1-201ENST00000426099 345 ntBASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AC027307.2-201ENST00000591252 911 ntBASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AL158211.3-201ENST00000607385 239 ntBASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AL390754.1-201ENST00000619088 582 ntBASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AL161645.1-201ENST00000622716 1255 ntBASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX2-3Q8TAU0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 ME2P1-201ENST00000426028 1970 ntBASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 SPDYE7P-202ENST00000420373 878 ntBASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 AP000842.3-202ENST00000569238 1080 ntBASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 AC025048.6-201ENST00000634326 1161 ntBASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX2-3Q8TAU0 LINC02199-201ENST00000506655 2702 ntBASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 TREML5P-201ENST00000421694 576 ntBASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AL596325.1-201ENST00000563991 1082 ntBASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AC084121.4-201ENST00000641598 221 ntBASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 AF228730.8-201ENST00000642140 221 ntBASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NKX2-3Q8TAU0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms