Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 MED15P5-201ENST00000423150 992 ntBASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 AL671883.3-201ENST00000603274 991 ntBASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 FAM197Y3-203ENST00000618346 717 ntBASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF9Q5VWM5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PRAMEF9Q5VWM5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
PRAMEF9Q5VWM5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 AC016027.1-202ENST00000607927 1699 ntBASIC15.89■□□□□ 0.13
PRAMEF9Q5VWM5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 AC024909.3-201ENST00000611513 2257 ntBASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF9Q5VWM5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms