Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SIGLEC16-201ENST00000599858 1437 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 AC092171.3-201ENST00000610122 2651 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 AC079776.2-201ENST00000641154 1609 ntBASIC12.75□□□□□ -0.37
HIST1H1AQ02539 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1AQ02539 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AC004817.3-201ENST00000602957 2129 ntBASIC12.74□□□□□ -0.37
HIST1H1AQ02539 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AL021920.2-201ENST00000624828 1351 ntBASIC12.74□□□□□ -0.37
HIST1H1AQ02539 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 UPK3BP1-201ENST00000428678 509 ntBASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AC132008.2-207ENST00000454517 770 ntBASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 AL161772.1-201ENST00000610494 4412 ntBASIC12.74□□□□□ -0.37
HIST1H1AQ02539 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1AQ02539 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 PAUPAR-201ENST00000630360 2965 ntBASIC12.73□□□□□ -0.37
HIST1H1AQ02539 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H1AQ02539 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms