Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLDN6P56747 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLDN6P56747 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.83■□□□□ 0.12
CLDN6P56747 KRT17P8-201ENST00000540749 863 ntBASIC15.83■□□□□ 0.12
CLDN6P56747 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.83■□□□□ 0.12
CLDN6P56747 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN6P56747 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN6P56747 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLDN6P56747 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN6P56747 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLDN6P56747 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN6P56747 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN6P56747 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN6P56747 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLDN6P56747 TMEM14DP-201ENST00000422205 345 ntBASIC15.82■□□□□ 0.12
CLDN6P56747 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN6P56747 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN6P56747 DOC2GP-202ENST00000514950 1163 ntBASIC15.82■□□□□ 0.12
CLDN6P56747 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.82■□□□□ 0.12
CLDN6P56747 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN6P56747 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.82■□□□□ 0.12
CLDN6P56747 MIR4259-201ENST00000584466 101 ntBASIC15.82■□□□□ 0.12
CLDN6P56747 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN6P56747 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLDN6P56747 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLDN6P56747 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLDN6P56747 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
CLDN6P56747 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN6P56747 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.82■□□□□ 0.12
CLDN6P56747 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLDN6P56747 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 FAM220BP-201ENST00000377689 816 ntBASIC15.81■□□□□ 0.12
CLDN6P56747 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLDN6P56747 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 DFFBP1-201ENST00000433250 979 ntBASIC15.81■□□□□ 0.12
CLDN6P56747 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN6P56747 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN6P56747 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.81■□□□□ 0.12
CLDN6P56747 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.81■□□□□ 0.12
CLDN6P56747 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN6P56747 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.81■□□□□ 0.12
CLDN6P56747 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLDN6P56747 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN6P56747 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms