Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH4P55283 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH4P55283 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 PMS2P2-201ENST00000425039 1128 ntBASIC16.86■□□□□ 0.29
CDH4P55283 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH4P55283 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH4P55283 AC109322.1-201ENST00000524499 1264 ntBASIC16.86■□□□□ 0.29
CDH4P55283 ALG1L8P-201ENST00000533887 760 ntBASIC16.86■□□□□ 0.29
CDH4P55283 AL512356.2-201ENST00000546955 174 ntBASIC16.86■□□□□ 0.29
CDH4P55283 AC004449.1-201ENST00000564240 433 ntBASIC16.86■□□□□ 0.29
CDH4P55283 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH4P55283 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 AP001059.3-201ENST00000619053 235 ntBASIC16.86■□□□□ 0.29
CDH4P55283 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
CDH4P55283 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CDH4P55283 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH4P55283 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH4P55283 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH4P55283 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CDH4P55283 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CDH4P55283 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH4P55283 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CDH4P55283 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH4P55283 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 AC005622.1-201ENST00000636801 1703 ntBASIC16.85■□□□□ 0.29
CDH4P55283 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CDH4P55283 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDH4P55283 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH4P55283 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH4P55283 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH4P55283 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH4P55283 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH4P55283 AC025678.2-201ENST00000562061 970 ntBASIC16.85■□□□□ 0.29
CDH4P55283 AC026150.2-201ENST00000564693 1156 ntBASIC16.85■□□□□ 0.29
CDH4P55283 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH4P55283 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH4P55283 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH4P55283 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH4P55283 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH4P55283 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH4P55283 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH4P55283 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH4P55283 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.84■□□□□ 0.29
CDH4P55283 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH4P55283 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH4P55283 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CDH4P55283 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH4P55283 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms