Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 HCG4-201ENST00000418983 998 ntBASIC17.9■□□□□ 0.46
PDE6CP51160 CXCL1P1-201ENST00000502804 216 ntBASIC17.9■□□□□ 0.46
PDE6CP51160 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.9■□□□□ 0.46
PDE6CP51160 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.9■□□□□ 0.46
PDE6CP51160 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.9■□□□□ 0.46
PDE6CP51160 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.9■□□□□ 0.46
PDE6CP51160 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.9■□□□□ 0.46
PDE6CP51160 AC055717.3-201ENST00000622967 595 ntBASIC17.9■□□□□ 0.46
PDE6CP51160 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 AC006449.5-201ENST00000610658 2098 ntBASIC17.9■□□□□ 0.46
PDE6CP51160 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.9■□□□□ 0.46
PDE6CP51160 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
PDE6CP51160 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6CP51160 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.89■□□□□ 0.46
PDE6CP51160 KRT8P39-201ENST00000396270 1433 ntBASIC17.89■□□□□ 0.46
PDE6CP51160 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.89■□□□□ 0.46
PDE6CP51160 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.89■□□□□ 0.46
PDE6CP51160 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.89■□□□□ 0.45
PDE6CP51160 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.89■□□□□ 0.45
PDE6CP51160 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.89■□□□□ 0.45
PDE6CP51160 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.89■□□□□ 0.45
PDE6CP51160 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.89■□□□□ 0.45
PDE6CP51160 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.89■□□□□ 0.45
PDE6CP51160 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.89■□□□□ 0.45
PDE6CP51160 AC092183.1-201ENST00000469884 875 ntBASIC17.89■□□□□ 0.45
PDE6CP51160 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.89■□□□□ 0.45
PDE6CP51160 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.89■□□□□ 0.45
PDE6CP51160 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.89■□□□□ 0.45
PDE6CP51160 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PDE6CP51160 OR7E47P-204ENST00000575924 449 ntBASIC17.89■□□□□ 0.45
PDE6CP51160 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.89■□□□□ 0.45
PDE6CP51160 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.89■□□□□ 0.45
PDE6CP51160 AC004877.2-201ENST00000623941 599 ntBASIC17.89■□□□□ 0.45
PDE6CP51160 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDE6CP51160 BCAR1-209ENST00000546196 1340 ntBASIC17.89■□□□□ 0.45
PDE6CP51160 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6CP51160 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 FER1L4-210ENST00000615531 5998 ntBASIC17.88■□□□□ 0.45
PDE6CP51160 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.88■□□□□ 0.45
PDE6CP51160 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.88■□□□□ 0.45
PDE6CP51160 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
PDE6CP51160 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PDE6CP51160 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6CP51160 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 AC092865.6-201ENST00000642101 219 ntBASIC17.88■□□□□ 0.45
PDE6CP51160 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6CP51160 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6CP51160 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6CP51160 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6CP51160 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms