Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CPT1AP50416 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.18■□□□□ 0.5
CPT1AP50416 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.18■□□□□ 0.5
CPT1AP50416 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CPT1AP50416 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CPT1AP50416 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.18■□□□□ 0.5
CPT1AP50416 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.18■□□□□ 0.5
CPT1AP50416 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.18■□□□□ 0.5
CPT1AP50416 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 AL512384.1-201ENST00000406683 331 ntBASIC18.18■□□□□ 0.5
CPT1AP50416 CHCHD2P3-201ENST00000603038 451 ntBASIC18.18■□□□□ 0.5
CPT1AP50416 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.18■□□□□ 0.5
CPT1AP50416 AC004790.1-201ENST00000612686 536 ntBASIC18.18■□□□□ 0.5
CPT1AP50416 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.18■□□□□ 0.5
CPT1AP50416 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
CPT1AP50416 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.18■□□□□ 0.5
CPT1AP50416 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CPT1AP50416 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CPT1AP50416 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPT1AP50416 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CPT1AP50416 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CPT1AP50416 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CPT1AP50416 PKD1P1-201ENST00000458669 6805 ntBASIC18.17■□□□□ 0.5
CPT1AP50416 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.17■□□□□ 0.5
CPT1AP50416 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CPT1AP50416 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
CPT1AP50416 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CPT1AP50416 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.17■□□□□ 0.5
CPT1AP50416 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.17■□□□□ 0.5
CPT1AP50416 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CPT1AP50416 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CPT1AP50416 AC007431.3-201ENST00000623221 587 ntBASIC18.17■□□□□ 0.5
CPT1AP50416 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CPT1AP50416 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CPT1AP50416 AC006538.1-201ENST00000567905 1585 ntBASIC18.17■□□□□ 0.5
CPT1AP50416 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPT1AP50416 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CPT1AP50416 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CPT1AP50416 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
CPT1AP50416 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPT1AP50416 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CPT1AP50416 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPT1AP50416 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPT1AP50416 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.16■□□□□ 0.5
CPT1AP50416 TPRX2P-201ENST00000535362 881 ntBASIC18.16■□□□□ 0.5
CPT1AP50416 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CPT1AP50416 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms