Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
GDF5P43026 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.13■□□□□ 0.17
GDF5P43026 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
GDF5P43026 IL9RP2-201ENST00000423948 1312 ntBASIC16.13■□□□□ 0.17
GDF5P43026 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.13■□□□□ 0.17
GDF5P43026 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.13■□□□□ 0.17
GDF5P43026 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GDF5P43026 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.13■□□□□ 0.17
GDF5P43026 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GDF5P43026 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GDF5P43026 RNU1-129P-201ENST00000384064 167 ntBASIC16.12■□□□□ 0.17
GDF5P43026 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 AC007967.2-201ENST00000432613 625 ntBASIC16.12■□□□□ 0.17
GDF5P43026 KRT18P2-201ENST00000447938 1258 ntBASIC16.12■□□□□ 0.17
GDF5P43026 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.12■□□□□ 0.17
GDF5P43026 AC096734.2-201ENST00000562054 433 ntBASIC16.12■□□□□ 0.17
GDF5P43026 AC145285.3-201ENST00000564603 959 ntBASIC16.12■□□□□ 0.17
GDF5P43026 AL031432.2-201ENST00000566714 459 ntBASIC16.12■□□□□ 0.17
GDF5P43026 AC018845.2-201ENST00000568326 409 ntBASIC16.12■□□□□ 0.17
GDF5P43026 AL928711.1-201ENST00000570165 459 ntBASIC16.12■□□□□ 0.17
GDF5P43026 U1.21-201ENST00000580816 167 ntBASIC16.12■□□□□ 0.17
GDF5P43026 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.12■□□□□ 0.17
GDF5P43026 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GDF5P43026 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GDF5P43026 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GDF5P43026 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GDF5P43026 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
GDF5P43026 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 AL590627.1-203ENST00000421194 1026 ntBASIC16.11■□□□□ 0.17
GDF5P43026 RHOQP3-201ENST00000437982 621 ntBASIC16.11■□□□□ 0.17
GDF5P43026 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.11■□□□□ 0.17
GDF5P43026 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.11■□□□□ 0.17
GDF5P43026 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.11■□□□□ 0.17
GDF5P43026 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.11■□□□□ 0.17
GDF5P43026 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 AL645728.2-201ENST00000641974 660 ntBASIC16.11■□□□□ 0.17
GDF5P43026 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.11■□□□□ 0.17
GDF5P43026 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 AL596087.1-201ENST00000400979 1969 ntBASIC16.11■□□□□ 0.17
GDF5P43026 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GDF5P43026 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.11■□□□□ 0.17
GDF5P43026 AL513523.2-202ENST00000427283 2040 ntBASIC16.11■□□□□ 0.17
GDF5P43026 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms