Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.77■□□□□ 0.27
HADHAP40939 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HADHAP40939 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
HADHAP40939 ZNF259P1-201ENST00000407656 1365 ntBASIC16.77■□□□□ 0.27
HADHAP40939 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HADHAP40939 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.76■□□□□ 0.27
HADHAP40939 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHAP40939 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHAP40939 AC096734.2-201ENST00000562054 433 ntBASIC16.76■□□□□ 0.27
HADHAP40939 AC034105.1-201ENST00000563488 319 ntBASIC16.76■□□□□ 0.27
HADHAP40939 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.76■□□□□ 0.27
HADHAP40939 AL645728.2-201ENST00000641974 660 ntBASIC16.76■□□□□ 0.27
HADHAP40939 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 KRT8P39-201ENST00000396270 1433 ntBASIC16.76■□□□□ 0.27
HADHAP40939 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HADHAP40939 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HADHAP40939 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HADHAP40939 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.76■□□□□ 0.27
HADHAP40939 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HADHAP40939 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 GGT3P-204ENST00000453783 1664 ntBASIC16.75■□□□□ 0.27
HADHAP40939 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 AL662844.4-201ENST00000606367 2838 ntBASIC16.75■□□□□ 0.27
HADHAP40939 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HADHAP40939 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.75■□□□□ 0.27
HADHAP40939 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
HADHAP40939 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HADHAP40939 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 AL513480.1-201ENST00000451731 511 ntBASIC16.75■□□□□ 0.27
HADHAP40939 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 AC120114.3-201ENST00000611923 658 ntBASIC16.75■□□□□ 0.27
HADHAP40939 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.75■□□□□ 0.27
HADHAP40939 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.75■□□□□ 0.27
HADHAP40939 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HADHAP40939 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
HADHAP40939 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.75■□□□□ 0.27
HADHAP40939 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.75■□□□□ 0.27
HADHAP40939 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HADHAP40939 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
HADHAP40939 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HADHAP40939 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms