Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HTR1EP28566 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.9■□□□□ 0.14
HTR1EP28566 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.9■□□□□ 0.14
HTR1EP28566 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.9■□□□□ 0.14
HTR1EP28566 AC004967.1-201ENST00000453589 447 ntBASIC15.9■□□□□ 0.14
HTR1EP28566 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.9■□□□□ 0.14
HTR1EP28566 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 RNA5SP415-201ENST00000517246 115 ntBASIC15.9■□□□□ 0.14
HTR1EP28566 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.9■□□□□ 0.14
HTR1EP28566 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HTR1EP28566 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HTR1EP28566 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.9■□□□□ 0.14
HTR1EP28566 AP005117.1-201ENST00000584346 1413 ntBASIC15.9■□□□□ 0.14
HTR1EP28566 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 HYMAI-201ENST00000635591 3347 ntBASIC15.9■□□□□ 0.14
HTR1EP28566 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.9■□□□□ 0.14
HTR1EP28566 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HTR1EP28566 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HTR1EP28566 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.89■□□□□ 0.13
HTR1EP28566 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.89■□□□□ 0.13
HTR1EP28566 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HTR1EP28566 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.89■□□□□ 0.13
HTR1EP28566 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.89■□□□□ 0.13
HTR1EP28566 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 SIGLEC30P-201ENST00000455569 941 ntBASIC15.89■□□□□ 0.13
HTR1EP28566 SART3-203ENST00000546611 1184 ntBASIC15.89■□□□□ 0.13
HTR1EP28566 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.89■□□□□ 0.13
HTR1EP28566 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 INTS4P1-201ENST00000438455 1935 ntBASIC15.89■□□□□ 0.13
HTR1EP28566 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.89■□□□□ 0.13
HTR1EP28566 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.89■□□□□ 0.13
HTR1EP28566 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.89■□□□□ 0.13
HTR1EP28566 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HTR1EP28566 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTR1EP28566 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTR1EP28566 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HTR1EP28566 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTR1EP28566 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms