Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCND1P24385 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 AKR1C7P-201ENST00000305623 895 ntBASIC16.73■□□□□ 0.27
CCND1P24385 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
CCND1P24385 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.73■□□□□ 0.27
CCND1P24385 DUSP5P1-201ENST00000441325 1139 ntBASIC16.73■□□□□ 0.27
CCND1P24385 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.73■□□□□ 0.27
CCND1P24385 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.73■□□□□ 0.27
CCND1P24385 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
CCND1P24385 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCND1P24385 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.73■□□□□ 0.27
CCND1P24385 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.73■□□□□ 0.27
CCND1P24385 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 AC097637.2-201ENST00000624096 1997 ntBASIC16.73■□□□□ 0.27
CCND1P24385 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCND1P24385 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCND1P24385 EGFEM1P-202ENST00000431685 1563 ntBASIC16.72■□□□□ 0.27
CCND1P24385 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.72■□□□□ 0.27
CCND1P24385 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.72■□□□□ 0.27
CCND1P24385 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 AL589182.2-201ENST00000619332 1049 ntBASIC16.72■□□□□ 0.27
CCND1P24385 AL691432.3-201ENST00000621860 400 ntBASIC16.72■□□□□ 0.27
CCND1P24385 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
CCND1P24385 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.72■□□□□ 0.27
CCND1P24385 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCND1P24385 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.71■□□□□ 0.27
CCND1P24385 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CCND1P24385 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.71■□□□□ 0.27
CCND1P24385 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.71■□□□□ 0.27
CCND1P24385 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.71■□□□□ 0.27
CCND1P24385 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCND1P24385 AL450487.1-201ENST00000426799 995 ntBASIC16.71■□□□□ 0.27
CCND1P24385 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms