Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCLP19338 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.79■□□□□ 0.76
NCLP19338 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.79■□□□□ 0.76
NCLP19338 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLP19338 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCLP19338 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.79■□□□□ 0.76
NCLP19338 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLP19338 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NCLP19338 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NCLP19338 AC132938.5-201ENST00000624980 1813 ntBASIC19.79■□□□□ 0.76
NCLP19338 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 TCAF2P1-201ENST00000291129 2421 ntBASIC19.78■□□□□ 0.76
NCLP19338 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.78■□□□□ 0.76
NCLP19338 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NCLP19338 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 AC144831.1-201ENST00000573312 2656 ntBASIC19.78■□□□□ 0.76
NCLP19338 FAAHP1-202ENST00000446499 1238 ntBASIC19.78■□□□□ 0.76
NCLP19338 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NCLP19338 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NCLP19338 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.78■□□□□ 0.76
NCLP19338 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.78■□□□□ 0.76
NCLP19338 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NCLP19338 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCLP19338 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NCLP19338 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NCLP19338 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
NCLP19338 AC003669.1-201ENST00000334569 611 ntBASIC19.77■□□□□ 0.76
NCLP19338 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.77■□□□□ 0.76
NCLP19338 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 AC091607.1-201ENST00000490318 1060 ntBASIC19.77■□□□□ 0.76
NCLP19338 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NCLP19338 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
NCLP19338 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.77■□□□□ 0.76
NCLP19338 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.77■□□□□ 0.76
NCLP19338 AC099336.1-202ENST00000602961 463 ntBASIC19.77■□□□□ 0.76
NCLP19338 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.77■□□□□ 0.76
NCLP19338 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.77■□□□□ 0.76
NCLP19338 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCLP19338 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.77■□□□□ 0.76
NCLP19338 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.77■□□□□ 0.76
NCLP19338 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCLP19338 AL365203.3-201ENST00000609742 2057 ntBASIC19.77■□□□□ 0.75
NCLP19338 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCLP19338 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NCLP19338 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NCLP19338 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.76■□□□□ 0.75
NCLP19338 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
NCLP19338 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCLP19338 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NCLP19338 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NCLP19338 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NCLP19338 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NCLP19338 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms