Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 AC002056.1-201ENST00000395613 760 ntBASIC17.76■□□□□ 0.43
CD58P19256 AC092474.2-201ENST00000424288 719 ntBASIC17.76■□□□□ 0.43
CD58P19256 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.76■□□□□ 0.43
CD58P19256 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.76■□□□□ 0.43
CD58P19256 MIR3909-201ENST00000579518 119 ntBASIC17.76■□□□□ 0.43
CD58P19256 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.76■□□□□ 0.43
CD58P19256 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 AC099522.2-201ENST00000607001 744 ntBASIC17.76■□□□□ 0.43
CD58P19256 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CD58P19256 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 AC092364.2-201ENST00000596710 2692 ntBASIC17.76■□□□□ 0.43
CD58P19256 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CD58P19256 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.75■□□□□ 0.43
CD58P19256 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CD58P19256 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 AC016027.1-202ENST00000607927 1699 ntBASIC17.75■□□□□ 0.43
CD58P19256 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.75■□□□□ 0.43
CD58P19256 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.75■□□□□ 0.43
CD58P19256 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CD58P19256 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.75■□□□□ 0.43
CD58P19256 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.75■□□□□ 0.43
CD58P19256 C20orf181-201ENST00000623918 480 ntBASIC17.75■□□□□ 0.43
CD58P19256 AC092902.6-201ENST00000641783 218 ntBASIC17.75■□□□□ 0.43
CD58P19256 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.75■□□□□ 0.43
CD58P19256 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CD58P19256 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD58P19256 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CD58P19256 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.74■□□□□ 0.43
CD58P19256 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.74■□□□□ 0.43
CD58P19256 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.74■□□□□ 0.43
CD58P19256 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.74■□□□□ 0.43
CD58P19256 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.74■□□□□ 0.43
CD58P19256 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.74■□□□□ 0.43
CD58P19256 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.74■□□□□ 0.43
CD58P19256 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.74■□□□□ 0.43
CD58P19256 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.74■□□□□ 0.43
CD58P19256 HTR5BP-201ENST00000430851 1154 ntBASIC17.74■□□□□ 0.43
CD58P19256 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD58P19256 DNAJB3-201ENST00000446806 729 ntBASIC17.74■□□□□ 0.43
CD58P19256 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms