Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
BMP4P12644 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.26■□□□□ 0.03
BMP4P12644 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BMP4P12644 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BMP4P12644 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BMP4P12644 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.25■□□□□ 0.03
BMP4P12644 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.25■□□□□ 0.03
BMP4P12644 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
BMP4P12644 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.25■□□□□ 0.03
BMP4P12644 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 FAM220CP-201ENST00000395253 831 ntBASIC15.25■□□□□ 0.03
BMP4P12644 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.25■□□□□ 0.03
BMP4P12644 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 AC124947.2-201ENST00000547118 1133 ntBASIC15.25■□□□□ 0.03
BMP4P12644 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 SLC25A6P4-201ENST00000586535 553 ntBASIC15.25■□□□□ 0.03
BMP4P12644 AC005336.2-201ENST00000593183 939 ntBASIC15.25■□□□□ 0.03
BMP4P12644 AL355877.3-201ENST00000622820 899 ntBASIC15.25■□□□□ 0.03
BMP4P12644 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BMP4P12644 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.25■□□□□ 0.03
BMP4P12644 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
BMP4P12644 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.25■□□□□ 0.03
BMP4P12644 SNX18-202ENST00000343017 3140 ntBASIC15.25■□□□□ 0.03
BMP4P12644 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.25■□□□□ 0.03
BMP4P12644 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BMP4P12644 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 AC006538.1-201ENST00000567905 1585 ntBASIC15.24■□□□□ 0.03
BMP4P12644 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 AC097374.2-201ENST00000618617 1306 ntBASIC15.24■□□□□ 0.03
BMP4P12644 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 INTS4P1-201ENST00000438455 1935 ntBASIC15.24■□□□□ 0.03
BMP4P12644 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 AC138035.3-201ENST00000622706 2791 ntBASIC15.24■□□□□ 0.03
BMP4P12644 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.24■□□□□ 0.03
BMP4P12644 AL022342.1-201ENST00000400363 863 ntBASIC15.24■□□□□ 0.03
BMP4P12644 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.24■□□□□ 0.03
BMP4P12644 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.24■□□□□ 0.03
BMP4P12644 MTDHP3-201ENST00000594186 672 ntBASIC15.24■□□□□ 0.03
BMP4P12644 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms