Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.1■□□□□ 0.01
P04436 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.1■□□□□ 0.01
P04436 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.1■□□□□ 0.01
P04436 Z92544.3-201ENST00000624747 417 ntBASIC15.1■□□□□ 0.01
P04436 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P04436 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P04436 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.1■□□□□ 0.01
P04436 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.1■□□□□ 0.01
P04436 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P04436 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04436 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.1■□□□□ 0.01
P04436 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.1■□□□□ 0.01
P04436 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.09■□□□□ 0.01
P04436 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
P04436 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.09■□□□□ 0.01
P04436 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.09■□□□□ 0.01
P04436 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 GPAA1P2-202ENST00000606848 1787 ntBASIC15.09■□□□□ 0.01
P04436 AC073439.1-201ENST00000624121 1774 ntBASIC15.09■□□□□ 0.01
P04436 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.09■□□□□ 0.01
P04436 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.09■□□□□ 0.01
P04436 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
P04436 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.09■□□□□ 0.01
P04436 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.09■□□□□ 0.01
P04436 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.09■□□□□ 0.01
P04436 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.09■□□□□ 0.01
P04436 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.09■□□□□ 0.01
P04436 AL512356.2-201ENST00000546955 174 ntBASIC15.09■□□□□ 0.01
P04436 AC026150.2-201ENST00000564693 1156 ntBASIC15.09■□□□□ 0.01
P04436 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.09■□□□□ 0.01
P04436 AC073389.1-201ENST00000595595 795 ntBASIC15.09■□□□□ 0.01
P04436 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 AL355385.1-201ENST00000606123 409 ntBASIC15.09■□□□□ 0.01
P04436 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.09■□□□□ 0.01
P04436 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
P04436 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.09■□□□□ 0.01
P04436 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.09■□□□□ 0.01
P04436 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
P04436 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
P04436 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
P04436 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04436 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
P04436 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.08■□□□□ 0.01
P04436 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
P04436 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
P04436 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
P04436 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
P04436 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
P04436 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
P04436 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04436 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04436 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
P04436 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04436 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.08■□□□□ 0
P04436 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.08■□□□□ 0
P04436 GPS2P2-201ENST00000430745 888 ntBASIC15.08■□□□□ 0
P04436 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.08■□□□□ 0
P04436 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.08■□□□□ 0
P04436 AC069262.1-201ENST00000539058 672 ntBASIC15.08■□□□□ 0
P04436 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.08■□□□□ 0
P04436 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04436 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms