Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.51■□□□□ 0.07
OPN1SWP03999 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 PMS2P1-201ENST00000431037 1228 ntBASIC15.51■□□□□ 0.07
OPN1SWP03999 FGFR3P6-201ENST00000457012 610 ntBASIC15.51■□□□□ 0.07
OPN1SWP03999 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.51■□□□□ 0.07
OPN1SWP03999 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.51■□□□□ 0.07
OPN1SWP03999 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.51■□□□□ 0.07
OPN1SWP03999 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.51■□□□□ 0.07
OPN1SWP03999 AC008608.2-201ENST00000606089 416 ntBASIC15.51■□□□□ 0.07
OPN1SWP03999 AL355877.3-201ENST00000622820 899 ntBASIC15.51■□□□□ 0.07
OPN1SWP03999 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
OPN1SWP03999 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.51■□□□□ 0.07
OPN1SWP03999 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
OPN1SWP03999 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.51■□□□□ 0.07
OPN1SWP03999 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 SLC22A20-204ENST00000530038 1673 ntBASIC15.51■□□□□ 0.07
OPN1SWP03999 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPN1SWP03999 AC006504.4-201ENST00000592118 1568 ntBASIC15.5■□□□□ 0.07
OPN1SWP03999 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.5■□□□□ 0.07
OPN1SWP03999 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
OPN1SWP03999 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 PCGF3-213ENST00000620529 1899 ntBASIC15.5■□□□□ 0.07
OPN1SWP03999 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
OPN1SWP03999 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPN1SWP03999 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.49■□□□□ 0.07
OPN1SWP03999 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 KRT18P31-201ENST00000506277 1292 ntBASIC15.49■□□□□ 0.07
OPN1SWP03999 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.49■□□□□ 0.07
OPN1SWP03999 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.49■□□□□ 0.07
OPN1SWP03999 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.49■□□□□ 0.07
OPN1SWP03999 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.49■□□□□ 0.07
OPN1SWP03999 CYP2A7P1-201ENST00000595391 815 ntBASIC15.49■□□□□ 0.07
OPN1SWP03999 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms