Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC004854.2-201ENST00000608450 1441 ntBASIC14.77□□□□□ -0.04
PFDN1O60925 LINC02447-202ENST00000501888 2146 ntBASIC14.77□□□□□ -0.04
PFDN1O60925 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.77□□□□□ -0.04
PFDN1O60925 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
PFDN1O60925 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PFDN1O60925 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
PFDN1O60925 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.77□□□□□ -0.04
PFDN1O60925 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.77□□□□□ -0.05
PFDN1O60925 MIR939-201ENST00000401314 82 ntBASIC14.77□□□□□ -0.05
PFDN1O60925 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PFDN1O60925 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.77□□□□□ -0.05
PFDN1O60925 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.77□□□□□ -0.05
PFDN1O60925 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PFDN1O60925 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PFDN1O60925 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.76□□□□□ -0.05
PFDN1O60925 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.76□□□□□ -0.05
PFDN1O60925 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.76□□□□□ -0.05
PFDN1O60925 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.76□□□□□ -0.05
PFDN1O60925 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PFDN1O60925 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.76□□□□□ -0.05
PFDN1O60925 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.76□□□□□ -0.05
PFDN1O60925 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PFDN1O60925 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PFDN1O60925 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14.75□□□□□ -0.05
PFDN1O60925 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.75□□□□□ -0.05
PFDN1O60925 CDC14C-201ENST00000428251 1719 ntBASIC14.75□□□□□ -0.05
PFDN1O60925 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.75□□□□□ -0.05
PFDN1O60925 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PFDN1O60925 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 AC016027.1-202ENST00000607927 1699 ntBASIC14.75□□□□□ -0.05
PFDN1O60925 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PFDN1O60925 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms