Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.33■□□□□ 0.36
OPHN1O60890 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.33■□□□□ 0.36
OPHN1O60890 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 MIR770-201ENST00000390219 98 ntBASIC17.33■□□□□ 0.36
OPHN1O60890 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.33■□□□□ 0.36
OPHN1O60890 VN2R19P-201ENST00000442399 1052 ntBASIC17.33■□□□□ 0.36
OPHN1O60890 CEND1P1-201ENST00000451006 455 ntBASIC17.33■□□□□ 0.36
OPHN1O60890 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.33■□□□□ 0.36
OPHN1O60890 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.33■□□□□ 0.36
OPHN1O60890 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
OPHN1O60890 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.33■□□□□ 0.36
OPHN1O60890 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.33■□□□□ 0.36
OPHN1O60890 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 AC106028.4-201ENST00000614509 607 ntBASIC17.33■□□□□ 0.36
OPHN1O60890 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.33■□□□□ 0.36
OPHN1O60890 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.33■□□□□ 0.36
OPHN1O60890 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OPHN1O60890 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 AL603756.1-201ENST00000606511 2163 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 ELL2P1-201ENST00000413990 1906 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.32■□□□□ 0.36
OPHN1O60890 PAWRP1-201ENST00000451083 565 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.32■□□□□ 0.36
OPHN1O60890 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.32■□□□□ 0.36
OPHN1O60890 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 AC018845.2-201ENST00000568326 409 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 AL078644.1-201ENST00000609881 752 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 AL513190.1-201ENST00000621254 727 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 HLA-A-202ENST00000376806 1854 ntBASIC17.32■□□□□ 0.36
OPHN1O60890 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
OPHN1O60890 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.32■□□□□ 0.36
OPHN1O60890 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OPHN1O60890 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.31■□□□□ 0.36
OPHN1O60890 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 AC092171.3-201ENST00000610122 2651 ntBASIC17.31■□□□□ 0.36
OPHN1O60890 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.31■□□□□ 0.36
OPHN1O60890 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.31■□□□□ 0.36
OPHN1O60890 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.31■□□□□ 0.36
OPHN1O60890 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
OPHN1O60890 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
OPHN1O60890 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.31■□□□□ 0.36
OPHN1O60890 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.31■□□□□ 0.36
OPHN1O60890 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms