Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GSC2O15499 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.96■□□□□ 0.14
GSC2O15499 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.96■□□□□ 0.14
GSC2O15499 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
GSC2O15499 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
GSC2O15499 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.95■□□□□ 0.14
GSC2O15499 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 PCGF3-213ENST00000620529 1899 ntBASIC15.95■□□□□ 0.14
GSC2O15499 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 AP003680.1-201ENST00000598970 3660 ntBASIC15.95■□□□□ 0.14
GSC2O15499 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 ACTG1P4-201ENST00000425123 1122 ntBASIC15.95■□□□□ 0.14
GSC2O15499 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 AC008550.1-201ENST00000511500 884 ntBASIC15.95■□□□□ 0.14
GSC2O15499 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.95■□□□□ 0.14
GSC2O15499 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 AC141257.4-201ENST00000634557 245 ntBASIC15.95■□□□□ 0.14
GSC2O15499 AC136944.6-201ENST00000634818 245 ntBASIC15.95■□□□□ 0.14
GSC2O15499 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GSC2O15499 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.95■□□□□ 0.14
GSC2O15499 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.95■□□□□ 0.14
GSC2O15499 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.95■□□□□ 0.14
GSC2O15499 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 LINC01101-201ENST00000622953 1884 ntBASIC15.95■□□□□ 0.14
GSC2O15499 CICP23-201ENST00000605013 2741 ntBASIC15.95■□□□□ 0.14
GSC2O15499 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GSC2O15499 KRT8P39-201ENST00000396270 1433 ntBASIC15.94■□□□□ 0.14
GSC2O15499 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.94■□□□□ 0.14
GSC2O15499 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.94■□□□□ 0.14
GSC2O15499 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
GSC2O15499 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
GSC2O15499 AL390719.2-201ENST00000606993 987 ntBASIC15.94■□□□□ 0.14
GSC2O15499 AD001527.2-201ENST00000622994 785 ntBASIC15.94■□□□□ 0.14
GSC2O15499 AC010947.1-201ENST00000623454 693 ntBASIC15.94■□□□□ 0.14
GSC2O15499 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.94■□□□□ 0.14
GSC2O15499 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.94■□□□□ 0.14
GSC2O15499 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GSC2O15499 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.94■□□□□ 0.14
GSC2O15499 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.94■□□□□ 0.14
GSC2O15499 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms