Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC28A1O00337 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC28A1O00337 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 MRPL20P1-201ENST00000400819 433 ntBASIC15.96■□□□□ 0.15
SLC28A1O00337 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC28A1O00337 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 AC105339.3-201ENST00000560043 636 ntBASIC15.96■□□□□ 0.15
SLC28A1O00337 AL603832.2-201ENST00000566195 2125 ntBASIC15.96■□□□□ 0.15
SLC28A1O00337 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
SLC28A1O00337 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 AC008735.5-201ENST00000623544 497 ntBASIC15.96■□□□□ 0.15
SLC28A1O00337 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC28A1O00337 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC28A1O00337 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC28A1O00337 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.96■□□□□ 0.14
SLC28A1O00337 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC28A1O00337 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC28A1O00337 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC28A1O00337 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.96■□□□□ 0.14
SLC28A1O00337 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.96■□□□□ 0.14
SLC28A1O00337 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC28A1O00337 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 REXO1L8P-201ENST00000604378 1897 ntBASIC15.95■□□□□ 0.14
SLC28A1O00337 AC012569.1-201ENST00000591191 1524 ntBASIC15.95■□□□□ 0.14
SLC28A1O00337 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC28A1O00337 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 AC024909.3-201ENST00000611513 2257 ntBASIC15.95■□□□□ 0.14
SLC28A1O00337 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC28A1O00337 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 AL356488.2-201ENST00000602755 427 ntBASIC15.95■□□□□ 0.14
SLC28A1O00337 AC005593.1-201ENST00000624894 515 ntBASIC15.95■□□□□ 0.14
SLC28A1O00337 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC28A1O00337 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC28A1O00337 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC28A1O00337 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC28A1O00337 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC28A1O00337 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC28A1O00337 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC28A1O00337 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 RPS2P28-201ENST00000314255 741 ntBASIC15.94■□□□□ 0.14
SLC28A1O00337 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.94■□□□□ 0.14
SLC28A1O00337 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC28A1O00337 CLEC4GP1-201ENST00000596555 870 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms