Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARVCFO00192 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ARVCFO00192 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ARVCFO00192 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
ARVCFO00192 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.96■□□□□ 0.47
ARVCFO00192 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.96■□□□□ 0.47
ARVCFO00192 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.96■□□□□ 0.47
ARVCFO00192 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARVCFO00192 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ARVCFO00192 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.95■□□□□ 0.46
ARVCFO00192 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.95■□□□□ 0.46
ARVCFO00192 BOLA2P3-201ENST00000404566 256 ntBASIC17.95■□□□□ 0.46
ARVCFO00192 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.95■□□□□ 0.46
ARVCFO00192 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.95■□□□□ 0.46
ARVCFO00192 CROCCP4-201ENST00000457096 498 ntBASIC17.95■□□□□ 0.46
ARVCFO00192 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ARVCFO00192 RARRES2P5-201ENST00000564013 466 ntBASIC17.95■□□□□ 0.46
ARVCFO00192 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.95■□□□□ 0.46
ARVCFO00192 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.95■□□□□ 0.46
ARVCFO00192 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.95■□□□□ 0.46
ARVCFO00192 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ARVCFO00192 CDC14C-201ENST00000428251 1719 ntBASIC17.95■□□□□ 0.46
ARVCFO00192 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.95■□□□□ 0.46
ARVCFO00192 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARVCFO00192 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 GPAA1P2-202ENST00000606848 1787 ntBASIC17.94■□□□□ 0.46
ARVCFO00192 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ARVCFO00192 FAM86MP-201ENST00000340703 885 ntBASIC17.94■□□□□ 0.46
ARVCFO00192 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ARVCFO00192 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 AC104596.2-201ENST00000512793 793 ntBASIC17.94■□□□□ 0.46
ARVCFO00192 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.94■□□□□ 0.46
ARVCFO00192 AP002490.2-201ENST00000524791 560 ntBASIC17.94■□□□□ 0.46
ARVCFO00192 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.94■□□□□ 0.46
ARVCFO00192 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.94■□□□□ 0.46
ARVCFO00192 AC025048.3-201ENST00000590609 569 ntBASIC17.94■□□□□ 0.46
ARVCFO00192 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 AC005702.4-201ENST00000618393 416 ntBASIC17.94■□□□□ 0.46
ARVCFO00192 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ARVCFO00192 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.94■□□□□ 0.46
ARVCFO00192 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.94■□□□□ 0.46
ARVCFO00192 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARVCFO00192 CLK3P2-201ENST00000427566 1453 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms