Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.35□□□□□ -0.27
SRRM4A7MD48 AC098831.1-202ENST00000438821 336 ntBASIC13.35□□□□□ -0.27
SRRM4A7MD48 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 AC108751.1-201ENST00000490852 363 ntBASIC13.35□□□□□ -0.27
SRRM4A7MD48 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 MIR4515-201ENST00000584082 81 ntBASIC13.35□□□□□ -0.27
SRRM4A7MD48 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SRRM4A7MD48 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 AC006449.6-201ENST00000612330 2296 ntBASIC13.34□□□□□ -0.27
SRRM4A7MD48 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.34□□□□□ -0.27
SRRM4A7MD48 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 AC007950.2-201ENST00000615045 2347 ntBASIC13.34□□□□□ -0.27
SRRM4A7MD48 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 CXCL1P1-201ENST00000502804 216 ntBASIC13.34□□□□□ -0.27
SRRM4A7MD48 UNC93B6-202ENST00000528242 690 ntBASIC13.34□□□□□ -0.27
SRRM4A7MD48 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 MIR4751-201ENST00000578027 74 ntBASIC13.34□□□□□ -0.27
SRRM4A7MD48 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.34□□□□□ -0.27
SRRM4A7MD48 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRRM4A7MD48 REXO1L8P-201ENST00000604378 1897 ntBASIC13.33□□□□□ -0.27
SRRM4A7MD48 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.33□□□□□ -0.27
SRRM4A7MD48 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRRM4A7MD48 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRRM4A7MD48 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRRM4A7MD48 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.33□□□□□ -0.27
SRRM4A7MD48 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SRRM4A7MD48 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRRM4A7MD48 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRRM4A7MD48 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 HMGA1P7-201ENST00000406908 502 ntBASIC13.33□□□□□ -0.28
SRRM4A7MD48 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 VN2R19P-201ENST00000442399 1052 ntBASIC13.33□□□□□ -0.28
SRRM4A7MD48 AC009947.1-201ENST00000444350 727 ntBASIC13.33□□□□□ -0.28
SRRM4A7MD48 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms