Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 MIR4674-201ENST00000582457 87 ntBASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AC010240.3-201ENST00000607688 395 ntBASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 AC117489.1-201ENST00000625169 3217 ntBASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.58□□□□□ -0.4
TRAPPC1Q9Y5R8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 AC020658.6-201ENST00000623564 1870 ntBASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 AC006015.1-201ENST00000429970 570 ntBASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 LINC00552-201ENST00000625151 2579 ntBASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 AC005252.3-201ENST00000623855 2258 ntBASIC12.57□□□□□ -0.4
TRAPPC1Q9Y5R8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAPPC1Q9Y5R8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms