Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 AC011676.5-201ENST00000624864 2660 ntBASIC18.59■□□□□ 0.57
COL20A1Q9P218 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL20A1Q9P218 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL20A1Q9P218 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL20A1Q9P218 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
COL20A1Q9P218 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL20A1Q9P218 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL20A1Q9P218 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL20A1Q9P218 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.58■□□□□ 0.57
COL20A1Q9P218 AGGF1P2-201ENST00000426656 2106 ntBASIC18.58■□□□□ 0.57
COL20A1Q9P218 AC005052.1-201ENST00000625181 2492 ntBASIC18.58■□□□□ 0.57
COL20A1Q9P218 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.58■□□□□ 0.57
COL20A1Q9P218 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL20A1Q9P218 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL20A1Q9P218 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 FAM207CP-201ENST00000443486 507 ntBASIC18.58■□□□□ 0.56
COL20A1Q9P218 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
COL20A1Q9P218 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 AC022144.1-201ENST00000602255 1580 ntBASIC18.58■□□□□ 0.56
COL20A1Q9P218 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL20A1Q9P218 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 LINC01144-201ENST00000626198 1710 ntBASIC18.57■□□□□ 0.56
COL20A1Q9P218 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 AC008738.7-201ENST00000609744 511 ntBASIC18.57■□□□□ 0.56
COL20A1Q9P218 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.57■□□□□ 0.56
COL20A1Q9P218 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL20A1Q9P218 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms