Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HACD3Q9P035 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.79■□□□□ 0.28
HACD3Q9P035 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.79■□□□□ 0.28
HACD3Q9P035 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 FLJ38576-201ENST00000623820 2459 ntBASIC16.79■□□□□ 0.28
HACD3Q9P035 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.79■□□□□ 0.28
HACD3Q9P035 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HACD3Q9P035 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HACD3Q9P035 HMGA1P7-201ENST00000406908 502 ntBASIC16.79■□□□□ 0.28
HACD3Q9P035 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.79■□□□□ 0.28
HACD3Q9P035 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.79■□□□□ 0.28
HACD3Q9P035 KRT18P3-201ENST00000451602 1288 ntBASIC16.79■□□□□ 0.28
HACD3Q9P035 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.79■□□□□ 0.28
HACD3Q9P035 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.79■□□□□ 0.28
HACD3Q9P035 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 AC140113.2-201ENST00000604370 208 ntBASIC16.79■□□□□ 0.28
HACD3Q9P035 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.79■□□□□ 0.28
HACD3Q9P035 CYP2T1P-202ENST00000641596 2535 ntBASIC16.79■□□□□ 0.28
HACD3Q9P035 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HACD3Q9P035 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HACD3Q9P035 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.78■□□□□ 0.28
HACD3Q9P035 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.78■□□□□ 0.28
HACD3Q9P035 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.78■□□□□ 0.28
HACD3Q9P035 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 AL022342.1-201ENST00000400363 863 ntBASIC16.78■□□□□ 0.28
HACD3Q9P035 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.78■□□□□ 0.28
HACD3Q9P035 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.78■□□□□ 0.28
HACD3Q9P035 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.78■□□□□ 0.28
HACD3Q9P035 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.78■□□□□ 0.28
HACD3Q9P035 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
HACD3Q9P035 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
HACD3Q9P035 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HACD3Q9P035 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HACD3Q9P035 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HACD3Q9P035 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HACD3Q9P035 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.77■□□□□ 0.28
HACD3Q9P035 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HACD3Q9P035 BCAR1-209ENST00000546196 1340 ntBASIC16.77■□□□□ 0.28
HACD3Q9P035 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.77■□□□□ 0.28
HACD3Q9P035 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HACD3Q9P035 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 RNU1-129P-201ENST00000384064 167 ntBASIC16.77■□□□□ 0.28
HACD3Q9P035 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 PMS2P4-201ENST00000412466 1052 ntBASIC16.77■□□□□ 0.28
HACD3Q9P035 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
HACD3Q9P035 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
HACD3Q9P035 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.77■□□□□ 0.28
HACD3Q9P035 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.77■□□□□ 0.28
HACD3Q9P035 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HACD3Q9P035 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.77■□□□□ 0.28
HACD3Q9P035 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HACD3Q9P035 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms