Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ELL3Q9HB65 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ELL3Q9HB65 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ELL3Q9HB65 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ELL3Q9HB65 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ELL3Q9HB65 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 SPDYE21P-201ENST00000413323 827 ntBASIC14.53□□□□□ -0.08
ELL3Q9HB65 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 ABCD1P5-201ENST00000445663 754 ntBASIC14.53□□□□□ -0.08
ELL3Q9HB65 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 CICP6-201ENST00000457191 2729 ntBASIC14.53□□□□□ -0.08
ELL3Q9HB65 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ELL3Q9HB65 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ELL3Q9HB65 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.52□□□□□ -0.08
ELL3Q9HB65 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
ELL3Q9HB65 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.52□□□□□ -0.08
ELL3Q9HB65 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
ELL3Q9HB65 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
ELL3Q9HB65 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ELL3Q9HB65 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 LINC00982-205ENST00000420957 435 ntBASIC14.52□□□□□ -0.09
ELL3Q9HB65 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 LINC01711-201ENST00000598340 967 ntBASIC14.52□□□□□ -0.09
ELL3Q9HB65 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.52□□□□□ -0.09
ELL3Q9HB65 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ELL3Q9HB65 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms