Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AC068880.1-201ENST00000507289 2297 ntBASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDH11XQ9BZA7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 AC119751.2-201ENST00000504529 210 ntBASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDH11XQ9BZA7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 PCGF3-213ENST00000620529 1899 ntBASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 AC006538.1-201ENST00000567905 1585 ntBASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 FO393414.2-201ENST00000405153 598 ntBASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 AC234783.1-201ENST00000441761 496 ntBASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 MIR4321-201ENST00000592276 80 ntBASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDH11XQ9BZA7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 AL136982.4-201ENST00000437689 1740 ntBASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 AC060834.1-201ENST00000443027 2032 ntBASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 AC008735.3-201ENST00000596646 500 ntBASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 AL365330.1-201ENST00000607459 531 ntBASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH11XQ9BZA7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 AC141586.5-201ENST00000624546 2050 ntBASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH11XQ9BZA7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms