Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.1
YIPF4Q9BSR8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 MRPL20P1-201ENST00000400819 433 ntBASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 AC116407.3-201ENST00000623905 1129 ntBASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 AL512652.2-201ENST00000625156 1716 ntBASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 PGM5P2-202ENST00000637225 1043 ntBASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF4Q9BSR8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 MIR1233-2-201ENST00000408138 82 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 MIR1233-1-201ENST00000408722 82 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC098831.1-202ENST00000438821 336 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 POLD2P1-201ENST00000511220 997 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC106730.1-201ENST00000566722 1090 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 OR7E47P-204ENST00000575924 449 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 MIR4751-201ENST00000578027 74 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC091167.2-201ENST00000579581 588 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 CYP2A7P1-201ENST00000595391 815 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC139530.3-201ENST00000620344 690 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms