Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
COL21A1Q96P44 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL21A1Q96P44 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 AC108751.1-201ENST00000490852 363 ntBASIC15.71■□□□□ 0.11
COL21A1Q96P44 UNC93B6-202ENST00000528242 690 ntBASIC15.71■□□□□ 0.11
COL21A1Q96P44 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.71■□□□□ 0.11
COL21A1Q96P44 AC105917.1-201ENST00000506637 2539 ntBASIC15.71■□□□□ 0.11
COL21A1Q96P44 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL21A1Q96P44 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.71■□□□□ 0.1
COL21A1Q96P44 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COL21A1Q96P44 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.71■□□□□ 0.1
COL21A1Q96P44 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
COL21A1Q96P44 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL21A1Q96P44 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
COL21A1Q96P44 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.71■□□□□ 0.1
COL21A1Q96P44 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL21A1Q96P44 LINC00554-201ENST00000564841 3011 ntBASIC15.7■□□□□ 0.1
COL21A1Q96P44 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.7■□□□□ 0.1
COL21A1Q96P44 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 MRPL20P1-201ENST00000400819 433 ntBASIC15.7■□□□□ 0.1
COL21A1Q96P44 AC108073.2-201ENST00000464002 357 ntBASIC15.7■□□□□ 0.1
COL21A1Q96P44 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 AC120114.3-201ENST00000611923 658 ntBASIC15.7■□□□□ 0.1
COL21A1Q96P44 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL21A1Q96P44 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.7■□□□□ 0.1
COL21A1Q96P44 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 AC132872.4-202ENST00000622924 2756 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.69■□□□□ 0.1
COL21A1Q96P44 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 AC009947.1-201ENST00000444350 727 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 AC087163.2-201ENST00000457299 853 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 HLA-J-202ENST00000469281 1241 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 RPL13AP23-201ENST00000480739 586 ntBASIC15.69■□□□□ 0.1
COL21A1Q96P44 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL21A1Q96P44 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms