Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.81■□□□□ 0.44
SNX27Q96L92 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.81■□□□□ 0.44
SNX27Q96L92 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.81■□□□□ 0.44
SNX27Q96L92 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.81■□□□□ 0.44
SNX27Q96L92 SPTSSB-204ENST00000617024 1292 ntBASIC17.81■□□□□ 0.44
SNX27Q96L92 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SNX27Q96L92 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNX27Q96L92 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.81■□□□□ 0.44
SNX27Q96L92 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SNX27Q96L92 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
SNX27Q96L92 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 AC106886.4-201ENST00000623557 2502 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX27Q96L92 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.8■□□□□ 0.44
SNX27Q96L92 TNRC18P3-201ENST00000441896 2691 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SNX27Q96L92 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SNX27Q96L92 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX27Q96L92 KLF2P3-201ENST00000451977 1087 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 AC098859.1-201ENST00000502915 1238 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 AP005018.1-201ENST00000525475 301 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SNX27Q96L92 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX27Q96L92 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX27Q96L92 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SNX27Q96L92 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SNX27Q96L92 PCGF3-213ENST00000620529 1899 ntBASIC17.8■□□□□ 0.44
SNX27Q96L92 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SNX27Q96L92 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SNX27Q96L92 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX27Q96L92 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SNX27Q96L92 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 FAM220BP-201ENST00000377689 816 ntBASIC17.79■□□□□ 0.44
SNX27Q96L92 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX27Q96L92 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX27Q96L92 AC002472.2-201ENST00000442739 958 ntBASIC17.79■□□□□ 0.44
SNX27Q96L92 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX27Q96L92 AC125807.1-201ENST00000483097 614 ntBASIC17.79■□□□□ 0.44
SNX27Q96L92 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.79■□□□□ 0.44
SNX27Q96L92 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX27Q96L92 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX27Q96L92 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX27Q96L92 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX27Q96L92 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX27Q96L92 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX27Q96L92 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX27Q96L92 UBALD1-205ENST00000590891 2641 ntBASIC17.79■□□□□ 0.44
SNX27Q96L92 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX27Q96L92 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SNX27Q96L92 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNX27Q96L92 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX27Q96L92 AC099398.1-201ENST00000567919 2776 ntBASIC17.78■□□□□ 0.44
SNX27Q96L92 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms