Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ATP5G2P1-201ENST00000433580 426 ntBASIC14.48□□□□□ -0.09
CPNE2Q96FN4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 AL589182.2-201ENST00000619332 1049 ntBASIC14.48□□□□□ -0.09
CPNE2Q96FN4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 AP005117.1-201ENST00000584346 1413 ntBASIC14.48□□□□□ -0.09
CPNE2Q96FN4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.48□□□□□ -0.09
CPNE2Q96FN4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 MTHFR-217ENST00000641820 1569 ntBASIC14.47□□□□□ -0.09
CPNE2Q96FN4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 AL590787.1-201ENST00000568856 1315 ntBASIC14.47□□□□□ -0.09
CPNE2Q96FN4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 FAM210CP-201ENST00000445714 574 ntBASIC14.47□□□□□ -0.09
CPNE2Q96FN4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.47□□□□□ -0.09
CPNE2Q96FN4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 AC007950.2-201ENST00000615045 2347 ntBASIC14.47□□□□□ -0.09
CPNE2Q96FN4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.47□□□□□ -0.09
CPNE2Q96FN4 AC002310.6-201ENST00000624451 1377 ntBASIC14.47□□□□□ -0.09
CPNE2Q96FN4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.46□□□□□ -0.09
CPNE2Q96FN4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 AC026691.1-201ENST00000602502 2017 ntBASIC14.46□□□□□ -0.09
CPNE2Q96FN4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 AC106795.1-205ENST00000512851 1056 ntBASIC14.46□□□□□ -0.09
CPNE2Q96FN4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 MIR3180-1-201ENST00000580374 94 ntBASIC14.46□□□□□ -0.09
CPNE2Q96FN4 MIR3180-3-201ENST00000584616 94 ntBASIC14.46□□□□□ -0.09
CPNE2Q96FN4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CPNE2Q96FN4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms