Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 AC023908.3-201ENST00000564211 3047 ntBASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ECEL1P2-202ENST00000465689 757 ntBASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ADM-205ENST00000528544 586 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 AL049757.1-201ENST00000616842 1596 ntBASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMIM11BQ8TCY0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 AC106881.1-201ENST00000605849 3329 ntBASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 RPS2P55-201ENST00000397318 883 ntBASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC10.79□□□□□ -0.68
SMIM11BQ8TCY0 AC007967.3-201ENST00000434308 558 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms