Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 AL162726.2-201ENST00000438986 1017 ntBASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 TIMM17BP1-201ENST00000545713 516 ntBASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC168Q8NDH2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 CLK3P2-201ENST00000427566 1453 ntBASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 AC138028.6-201ENST00000616106 1482 ntBASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC168Q8NDH2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 U62317.3-201ENST00000608319 855 ntBASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC168Q8NDH2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms