Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 MIR5100-201ENST00000579544 119 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AC063950.1-202ENST00000600133 568 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AC005520.3-201ENST00000602874 370 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 AC019129.2-201ENST00000609837 1235 ntBASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EFCAB3Q8N7B9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.63■□□□□ 0.25
EFCAB3Q8N7B9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AP002414.2-201ENST00000591780 3365 ntBASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 MYCLP1-201ENST00000372451 1075 ntBASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 INTS4P1-201ENST00000438455 1935 ntBASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 AC243591.1-201ENST00000452967 1364 ntBASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
EFCAB3Q8N7B9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EFCAB3Q8N7B9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms