Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC155Q8N6L0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 IGHV3-62-201ENST00000520057 340 ntBASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 AC190387.1-201ENST00000551683 408 ntBASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC155Q8N6L0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 AC078925.2-201ENST00000624013 1973 ntBASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
CCDC155Q8N6L0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 DUX4L27-201ENST00000554796 1261 ntBASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 AC243562.1-201ENST00000560672 389 ntBASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC155Q8N6L0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 TUBB3P1-201ENST00000405796 1332 ntBASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 AC051619.7-201ENST00000568314 623 ntBASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC155Q8N6L0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms