Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 AC005052.1-201ENST00000625181 2492 ntBASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 FAM8A3P-201ENST00000427218 844 ntBASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TUBB8P12-201ENST00000308911 1335 ntBASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TUBB7P-202ENST00000428444 1305 ntBASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TUBB8P7-204ENST00000567960 1332 ntBASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 AL021920.2-201ENST00000624828 1351 ntBASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC33Q8N5R6 AC046158.3-201ENST00000624947 2558 ntBASIC17.39■□□□□ 0.38
CCDC33Q8N5R6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC33Q8N5R6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC33Q8N5R6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
CCDC33Q8N5R6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC33Q8N5R6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AC011467.4-201ENST00000594891 528 ntBASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AC022145.2-201ENST00000598203 171 ntBASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AC093512.1-201ENST00000617969 520 ntBASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 HLA-A-202ENST00000376806 1854 ntBASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 ALOX12P2-203ENST00000570921 1945 ntBASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC33Q8N5R6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 KRT8P49-201ENST00000604166 1432 ntBASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 AL671710.1-201ENST00000610245 2349 ntBASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms