Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TTC9CQ8N5M4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 ALOX12P2-203ENST00000570921 1945 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 PCDHB19P-201ENST00000570871 2371 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 AL513480.1-201ENST00000451731 511 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 AC096734.2-201ENST00000562054 433 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 AC145285.3-201ENST00000564603 959 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 GGT4P-201ENST00000623672 1708 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TTC9CQ8N5M4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 RHOQP3-201ENST00000437982 621 ntBASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 FDX1P1-201ENST00000449115 551 ntBASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 MIR3909-201ENST00000579518 119 ntBASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 AC020765.3-201ENST00000613051 740 ntBASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 AC007064.4-201ENST00000637740 555 ntBASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms