Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC020765.3-201ENST00000613051 740 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 ELL2P1-201ENST00000413990 1906 ntBASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCUBE3Q8IX30 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 AL355306.1-201ENST00000415580 579 ntBASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 RPS8P6-201ENST00000426177 609 ntBASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 ACTG1P14-201ENST00000446382 1122 ntBASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 RARRES2P8-201ENST00000566335 367 ntBASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 MIR3197-201ENST00000582241 73 ntBASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCUBE3Q8IX30 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.39■□□□□ 0.38
SCUBE3Q8IX30 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.39■□□□□ 0.38
SCUBE3Q8IX30 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.39■□□□□ 0.38
SCUBE3Q8IX30 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SCUBE3Q8IX30 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
SCUBE3Q8IX30 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 TFAMP1-201ENST00000412727 736 ntBASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 AC004967.1-201ENST00000453589 447 ntBASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 YBX1P5-201ENST00000509441 847 ntBASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCUBE3Q8IX30 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms