Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 AC007967.4-201ENST00000614700 386 ntBASIC18.41■□□□□ 0.54
TRIM50Q86XT4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 AC073592.8-201ENST00000624126 511 ntBASIC18.41■□□□□ 0.54
TRIM50Q86XT4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM50Q86XT4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 CROCCP1-201ENST00000426910 5675 ntBASIC18.4■□□□□ 0.54
TRIM50Q86XT4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 SPTSSB-204ENST00000617024 1292 ntBASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 AC100757.3-201ENST00000622361 1406 ntBASIC18.4■□□□□ 0.54
TRIM50Q86XT4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM50Q86XT4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM50Q86XT4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM50Q86XT4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.39■□□□□ 0.54
TRIM50Q86XT4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 AL031731.1-201ENST00000642131 2094 ntBASIC18.39■□□□□ 0.53
TRIM50Q86XT4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM50Q86XT4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms