Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 AC012615.1-201ENST00000565797 1299 ntBASIC14.53□□□□□ -0.08
C11orf88Q6PI97 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
C11orf88Q6PI97 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
C11orf88Q6PI97 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 MIR3180-1-201ENST00000580374 94 ntBASIC14.52□□□□□ -0.09
C11orf88Q6PI97 MIR3180-3-201ENST00000584616 94 ntBASIC14.52□□□□□ -0.09
C11orf88Q6PI97 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 AC126335.2-201ENST00000623362 4637 ntBASIC14.52□□□□□ -0.09
C11orf88Q6PI97 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 AC067750.1-201ENST00000608826 6545 ntBASIC14.52□□□□□ -0.09
C11orf88Q6PI97 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.52□□□□□ -0.09
C11orf88Q6PI97 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 AC092384.3-202ENST00000564646 2873 ntBASIC14.51□□□□□ -0.09
C11orf88Q6PI97 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms