Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPB1Q06547 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GABPB1Q06547 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPB1Q06547 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPB1Q06547 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.92■□□□□ 0.3
GABPB1Q06547 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABPB1Q06547 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPB1Q06547 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABPB1Q06547 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPB1Q06547 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 AC124016.1-201ENST00000609552 612 ntBASIC16.91■□□□□ 0.3
GABPB1Q06547 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPB1Q06547 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPB1Q06547 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
GABPB1Q06547 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 MYO15B-237ENST00000642007 4893 ntBASIC16.91■□□□□ 0.3
GABPB1Q06547 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPB1Q06547 AC118758.2-201ENST00000614242 2813 ntBASIC16.91■□□□□ 0.3
GABPB1Q06547 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPB1Q06547 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPB1Q06547 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GABPB1Q06547 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPB1Q06547 BX640514.1-201ENST00000583223 1918 ntBASIC16.9■□□□□ 0.3
GABPB1Q06547 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
GABPB1Q06547 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GABPB1Q06547 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GABPB1Q06547 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.9■□□□□ 0.3
GABPB1Q06547 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPB1Q06547 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.9■□□□□ 0.3
GABPB1Q06547 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.9■□□□□ 0.3
GABPB1Q06547 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.9■□□□□ 0.3
GABPB1Q06547 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPB1Q06547 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPB1Q06547 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
GABPB1Q06547 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.89■□□□□ 0.3
GABPB1Q06547 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.89■□□□□ 0.3
GABPB1Q06547 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.89■□□□□ 0.3
GABPB1Q06547 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPB1Q06547 AC092127.1-201ENST00000567093 3455 ntBASIC16.89■□□□□ 0.29
GABPB1Q06547 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPB1Q06547 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABPB1Q06547 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABPB1Q06547 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPB1Q06547 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPB1Q06547 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPB1Q06547 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPB1Q06547 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPB1Q06547 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPB1Q06547 NTF6G-201ENST00000591094 616 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms