Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 PCGF3-213ENST00000620529 1899 ntBASIC16■□□□□ 0.15
HMGCS1Q01581 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 INIP-202ENST00000374236 874 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 KRT18P67-201ENST00000432816 1264 ntBASIC16■□□□□ 0.15
HMGCS1Q01581 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16■□□□□ 0.15
HMGCS1Q01581 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16■□□□□ 0.15
HMGCS1Q01581 AF186996.4-201ENST00000467186 377 ntBASIC16■□□□□ 0.15
HMGCS1Q01581 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16■□□□□ 0.15
HMGCS1Q01581 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16■□□□□ 0.15
HMGCS1Q01581 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16■□□□□ 0.15
HMGCS1Q01581 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16■□□□□ 0.15
HMGCS1Q01581 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16■□□□□ 0.15
HMGCS1Q01581 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16■□□□□ 0.15
HMGCS1Q01581 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGCS1Q01581 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 OR7E47P-204ENST00000575924 449 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 AC104692.2-201ENST00000603054 253 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 AC004790.2-201ENST00000623588 572 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 AC005593.1-201ENST00000624894 515 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 AP001350.2-201ENST00000625104 1094 ntBASIC15.99■□□□□ 0.15
HMGCS1Q01581 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGCS1Q01581 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGCS1Q01581 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms