Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S1P61966 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
AP1S1P61966 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
AP1S1P61966 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
AP1S1P61966 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 MIR346-201ENST00000362234 95 ntBASIC16.64■□□□□ 0.25
AP1S1P61966 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 AL627223.1-201ENST00000416693 442 ntBASIC16.64■□□□□ 0.25
AP1S1P61966 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.64■□□□□ 0.25
AP1S1P61966 RPS8P6-201ENST00000426177 609 ntBASIC16.64■□□□□ 0.25
AP1S1P61966 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.64■□□□□ 0.25
AP1S1P61966 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 AC093724.1-201ENST00000448659 1027 ntBASIC16.64■□□□□ 0.25
AP1S1P61966 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 AP000842.3-202ENST00000569238 1080 ntBASIC16.64■□□□□ 0.25
AP1S1P61966 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.64■□□□□ 0.25
AP1S1P61966 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
AP1S1P61966 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S1P61966 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP1S1P61966 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S1P61966 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.63■□□□□ 0.25
AP1S1P61966 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.63■□□□□ 0.25
AP1S1P61966 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.63■□□□□ 0.25
AP1S1P61966 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.63■□□□□ 0.25
AP1S1P61966 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.63■□□□□ 0.25
AP1S1P61966 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.63■□□□□ 0.25
AP1S1P61966 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.63■□□□□ 0.25
AP1S1P61966 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 ME2P1-201ENST00000426028 1970 ntBASIC16.63■□□□□ 0.25
AP1S1P61966 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP1S1P61966 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP1S1P61966 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S1P61966 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 UXT-AS1-201ENST00000590504 1525 ntBASIC16.62■□□□□ 0.25
AP1S1P61966 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S1P61966 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.62■□□□□ 0.25
AP1S1P61966 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.62■□□□□ 0.25
AP1S1P61966 AC023141.5-201ENST00000458585 616 ntBASIC16.62■□□□□ 0.25
AP1S1P61966 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.62■□□□□ 0.25
AP1S1P61966 AC093520.2-201ENST00000561830 333 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms