Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SHC1P29353 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
SHC1P29353 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 TOP3BP1-201ENST00000420768 1380 ntBASIC15.23■□□□□ 0.03
SHC1P29353 AL021920.2-201ENST00000624828 1351 ntBASIC15.23■□□□□ 0.03
SHC1P29353 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SHC1P29353 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SHC1P29353 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SHC1P29353 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SHC1P29353 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.22■□□□□ 0.03
SHC1P29353 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.22■□□□□ 0.03
SHC1P29353 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.22■□□□□ 0.03
SHC1P29353 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.22■□□□□ 0.03
SHC1P29353 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.22■□□□□ 0.03
SHC1P29353 FAM197Y3-203ENST00000618346 717 ntBASIC15.22■□□□□ 0.03
SHC1P29353 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SHC1P29353 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 PAUPAR-201ENST00000630360 2965 ntBASIC15.22■□□□□ 0.03
SHC1P29353 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.22■□□□□ 0.03
SHC1P29353 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SHC1P29353 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHC1P29353 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.21■□□□□ 0.03
SHC1P29353 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SHC1P29353 TUBB8P12-201ENST00000308911 1335 ntBASIC15.21■□□□□ 0.03
SHC1P29353 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 TUBB7P-202ENST00000428444 1305 ntBASIC15.21■□□□□ 0.03
SHC1P29353 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.21■□□□□ 0.03
SHC1P29353 TUBB8P7-204ENST00000567960 1332 ntBASIC15.21■□□□□ 0.03
SHC1P29353 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SHC1P29353 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 AL645728.1-201ENST00000366221 2101 ntBASIC15.21■□□□□ 0.03
SHC1P29353 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.21■□□□□ 0.03
SHC1P29353 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.21■□□□□ 0.03
SHC1P29353 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.21■□□□□ 0.03
SHC1P29353 PGAM5P1-201ENST00000518923 814 ntBASIC15.21■□□□□ 0.03
SHC1P29353 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.21■□□□□ 0.03
SHC1P29353 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.21■□□□□ 0.03
SHC1P29353 AC096734.2-201ENST00000562054 433 ntBASIC15.21■□□□□ 0.03
SHC1P29353 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.21■□□□□ 0.03
SHC1P29353 AC092865.6-201ENST00000642101 219 ntBASIC15.21■□□□□ 0.03
SHC1P29353 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SHC1P29353 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.21■□□□□ 0.03
SHC1P29353 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 AC022188.1-201ENST00000620960 1664 ntBASIC15.21■□□□□ 0.03
SHC1P29353 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHC1P29353 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SHC1P29353 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SHC1P29353 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHC1P29353 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHC1P29353 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SHC1P29353 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHC1P29353 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.21■□□□□ 0.02
SHC1P29353 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHC1P29353 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.2■□□□□ 0.02
SHC1P29353 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHC1P29353 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHC1P29353 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.2■□□□□ 0.02
SHC1P29353 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms