Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.66■■□□□ 1.38
CHGAP10645 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
CHGAP10645 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CHGAP10645 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHGAP10645 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
CHGAP10645 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CHGAP10645 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CHGAP10645 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC23.65■■□□□ 1.38
CHGAP10645 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CHGAP10645 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 AL391256.1-201ENST00000443260 1855 ntBASIC23.65■■□□□ 1.38
CHGAP10645 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.65■■□□□ 1.38
CHGAP10645 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC23.65■■□□□ 1.38
CHGAP10645 AC112492.5-201ENST00000421897 457 ntBASIC23.65■■□□□ 1.38
CHGAP10645 AC011495.1-201ENST00000498085 584 ntBASIC23.65■■□□□ 1.38
CHGAP10645 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC23.65■■□□□ 1.38
CHGAP10645 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.65■■□□□ 1.38
CHGAP10645 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.65■■□□□ 1.38
CHGAP10645 AL033527.5-202ENST00000641632 1098 ntBASIC23.65■■□□□ 1.38
CHGAP10645 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CHGAP10645 PP12613-201ENST00000424958 2230 ntBASIC23.65■■□□□ 1.38
CHGAP10645 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CHGAP10645 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.65■■□□□ 1.38
CHGAP10645 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHGAP10645 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC23.64■■□□□ 1.38
CHGAP10645 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC23.64■■□□□ 1.38
CHGAP10645 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHGAP10645 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHGAP10645 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC23.64■■□□□ 1.38
CHGAP10645 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHGAP10645 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHGAP10645 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC23.64■■□□□ 1.38
CHGAP10645 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CHGAP10645 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CHGAP10645 VMO1-203ENST00000416307 712 ntTSL 2 BASIC23.64■■□□□ 1.37
CHGAP10645 AC114501.2-201ENST00000439631 535 ntBASIC23.64■■□□□ 1.37
CHGAP10645 AL589987.1-201ENST00000453380 819 ntBASIC23.64■■□□□ 1.37
CHGAP10645 ACA64.2-201ENST00000459014 129 ntBASIC23.64■■□□□ 1.37
CHGAP10645 SERBP1P3-201ENST00000459980 809 ntBASIC23.64■■□□□ 1.37
CHGAP10645 SRD5A3P1-201ENST00000603021 949 ntBASIC23.64■■□□□ 1.37
CHGAP10645 AC004461.2-201ENST00000629517 803 ntBASIC23.64■■□□□ 1.37
CHGAP10645 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC23.64■■□□□ 1.37
CHGAP10645 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.37
CHGAP10645 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CHGAP10645 AL512652.2-201ENST00000625156 1716 ntBASIC23.64■■□□□ 1.37
CHGAP10645 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CHGAP10645 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 SLC7A15P-201ENST00000424028 1363 ntBASIC23.64■■□□□ 1.37
CHGAP10645 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC23.64■■□□□ 1.37
CHGAP10645 AL589702.1-201ENST00000641229 1509 ntBASIC23.64■■□□□ 1.37
CHGAP10645 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHGAP10645 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CHGAP10645 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC23.64■■□□□ 1.37
CHGAP10645 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
CHGAP10645 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC23.63■■□□□ 1.37
CHGAP10645 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CHGAP10645 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHGAP10645 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CHGAP10645 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CHGAP10645 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.63■■□□□ 1.37
CHGAP10645 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC23.63■■□□□ 1.37
CHGAP10645 AC079776.1-201ENST00000401540 1152 ntBASIC23.63■■□□□ 1.37
CHGAP10645 MIR1909-201ENST00000411312 80 ntBASIC23.63■■□□□ 1.37
CHGAP10645 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC23.63■■□□□ 1.37
CHGAP10645 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC23.63■■□□□ 1.37
CHGAP10645 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC23.63■■□□□ 1.37
CHGAP10645 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CHGAP10645 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHGAP10645 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC23.63■■□□□ 1.37
CHGAP10645 AC024267.1-201ENST00000582320 895 ntBASIC23.63■■□□□ 1.37
CHGAP10645 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC23.63■■□□□ 1.37
CHGAP10645 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHGAP10645 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC23.63■■□□□ 1.37
CHGAP10645 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC23.63■■□□□ 1.37
CHGAP10645 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.62■■□□□ 1.37
CHGAP10645 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
CHGAP10645 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHGAP10645 AC106820.2-201ENST00000563775 3264 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms